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Course Outline
Introduction to the Python programming language
- Why Python?
- Using Python to deal with biological data
- Working with the iPython shell
- Your first programme
- Writing Python scripts
- Importing modules
Working with protein and RNA/DNA sequences
- Finding motives
- Transcription and translation in silico
- Handling sequence alignments
Parsing data in different biological formats
- Parsing FASTA
- Data format conversions
Running biological analyses
- BLAST
- Accessing biological web services
Dealing with biological 3D structures using Python
Python facilitates statistical analysis
Visualizing data
- Creating bar and scatter plots
- Calculating an Area Under Curve (AUC)
Working with .xls and .csv files
- Importing data from and exporting to MS Excel / OpenOffice Calc
- Writing .xls and .csv files
Using Python to create an automated data processing pipeline
Requirements
Basic biological knowledge about protein, RNA and DNA sequences.
28 Hours
Delivery Options
Private Group Training
Our identity is rooted in delivering exactly what our clients need.
- Pre-course call with your trainer
- Customisation of the learning experience to achieve your goals -
- Bespoke outlines
- Practical hands-on exercises containing data / scenarios recognisable to the learners
- Training scheduled on a date of your choice
- Delivered online, onsite/classroom or hybrid by experts sharing real world experience
Private Group Prices RRP from €9120 online delivery, based on a group of 2 delegates, €2880 per additional delegate (excludes any certification / exam costs). We recommend a maximum group size of 12 for most learning events.
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Public Training
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Testimonials (1)
The accesibilit of the trainer and the ability to communicate very effective,